Recent database update activity
2025-12-06:- Escherichia spp.: 9 isolates
- Salmonella spp.: 10 isolates
- Bacillus cereus: 2 alleles
- Campylobacter jejuni/coli: 1 isolate; 1 MLST profile
- Escherichia spp.: 656 isolates; 10 alleles; 13 MLST (Achtman) profiles
- Glaesserella parasuis: 1 isolate; 1 MLST profile
- Mycoplasma gallisepticum: 4 alleles; 1 MLST#1 (Ghanem) profile
- Neisseria spp.: 7 N. meningitidis cgMLST v3 profiles
- Salmonella spp.: 606 isolates; 2 alleles; 1 MLST profile; 592 SalmcgMLST v1.0 profiles
- Streptococcus pneumoniae: 168 isolates; 11 genomes; 543 alleles; 179 cgMLST profiles; 4 MLST profiles
- Streptococcus pyogenes: 5 cgMLST profiles
- Vibrio parahaemolyticus: 1 allele
- Burkholderia cepacia complex: 2 isolates; 1 genome; 1 MLST profile
- Citrobacter spp.: 37 isolates; 37 genomes; 43 alleles; 33 MLST profiles
- Clostridium perfringens: 12 isolates; 2 cgMLST profiles
- Enterococcus faecalis: 2 isolates; 2 MLST profiles
- Enterococcus faecium: 2 isolates; 2 genomes; 200 alleles; 1 MLST profile
- Escherichia spp.: 718 isolates; 1 genome; 6 alleles; 10 MLST (Achtman) profiles
- Glaesserella parasuis: 3 alleles
- Haemophilus influenzae: 26 isolates; 21 genomes; 2,516 alleles; 20 cgMLST v1 profiles; 11 H. parainfluenzae cgMLST v1 profiles
- Mycobacteroides abscessus complex: 6 alleles
- Neisseria spp.: 7 isolates; 7 genomes; 77 alleles
- Salmonella spp.: 615 isolates; 7 alleles; 6 MLST profiles; 582 SalmcgMLST v1.0 profiles
- Staphylococcus aureus: 1 isolate; 5 MLST profiles
- Staphylococcus haemolyticus: 3 MLST profiles
- Staphylococcus hominis: 1 allele; 10 MLST profiles
- Streptococcus agalactiae: 1 isolate; 66 alleles; 1 MLST profile
- Streptococcus pneumoniae: 140 isolates; 184 genomes; 1,668 alleles
- Streptococcus pyogenes: 5 isolates; 5 genomes; 32 alleles